http://norcpm.wiki.uib.no/api.php?action=feedcontributions&feedformat=atom&user=IngoNorcpm - User contributions [en]2026-04-05T13:30:54ZUser contributionsMediaWiki 1.44.2http://norcpm.wiki.uib.no/index.php?title=Norwegian_Climate_Prediction_Model&diff=189Norwegian Climate Prediction Model2015-03-02T13:10:34Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
The Norwegian Climate Prediction Model (NorCPM) is aiming at providing prediction from seasonal-to-decadal time scale. It is based on the Norwegian Earth System Model (NorESM, [https://wiki.met.no/noresm/start]) and the Ensemble Kalman Filter (EnKF, [http://en.wikipedia.org/wiki/Ensemble_Kalman_filter]) data assimilation method. NorESM is a state of the art Earth system model that is based on CESM ([http://en.wikipedia.org/wiki/Community_Climate_System_Model]), but uses different aerosol/chemistry scheme and ocean model (evolved from MICOM). The EnKF is a sequential data assimilation method that allows for fully multivariate and flow dependent correct using a covariance matrix procuded by a Monte-Carlo ensemble integration. Currently the system only intend to update the ocean part as this is where most of the predictability is expected, but additional atmospheric nudging and assimilation of land variables are also considered.<br />
<br />
== News == <br />
<br />
== Model releases ==<br />
<br />
== Prediction activities == <br />
The optimal goal is to test the capability of our system on disparate phase of the climate in order to gain confidence on the robustnes of its accuracy. SST is the only observational data set available for a period of time sufficient (> 100 years) to clearly demonstrate skill for decadal prediction. Ideally a start date every 5 years seems achievable.<br />
<br />
<br />
=== Model-model prediction with assimilation of synthetic SST data === <br />
<br />
=== Evaluation of prediction hindcast simulations with real SST data === <br />
The observational data set used so far is the ensemble of SST data (refereed as HADISST2), which provide monthly SST for 1850--2007 with 10 members. Each member reconstructs SST using a different set of possible unknown parameters. <br />
At term we intend to perform retrospective reanalysis and decadal prediction (hindcast) over the last century, but here we have decided to focus on a shorter period (1980-2005) because the system is still premature and there are many independent observations during this period of time.<br />
== Existing runs == <br />
Following is a table that summarise the different experiment run so far:<br />
{| class="wikitable" style="text-align:center"<br />
|+Multiplication table<br />
|-<br />
! Name on Norstore !! NorESM version !! observation !! ens size !! Freq assim|| full_field/anom !! ocean var updated !! post process !! Masked coast !! localisation !! Atmo nudging !! Prediction !! Finished/Ongoing !! Remark<br />
|-<br />
! First_Try <br />
| F19_tn21 || SST || 30 || monthly|| anom || all || fixenkf || yes || point || no || 1990,1992,1995,1996 || Finished || minor bug in EnKF, small drift in MSL, good SPG<br />
|-<br />
! Second_Try <br />
| F19_tn21 || SST || 30 || monthly|| anom || all || fixenkf || yes || point || no || 1995 || Finished || small drift in MSL, good SPG<br />
|-<br />
! Third_Try<br />
| F19_tn21 || SST || 30 || monthly || anom || T and S || fixenkf || yes || point || no || none || Finished || weak SPG in reanalysis<br />
|-<br />
! Fourth_Try<br />
| F19_tn21 || SST || 30 || monthly || anom || T and S and Barot. || micomserial || yes || point || no || none || Finished || unrealistic<br />
|-<br />
! Fifth_Try<br />
| F19_tn21 || SST || 30 || monthly || anom || all || micom_serial || yes || point || no || 1995 || Finished || very mild improvement compare to second<br />
|-<br />
! ME<br />
| F19_G16 || SST || 30 || monthly || anom || all || micom_serial || yes || point || no || no || ongoing || ??<br />
|-<br />
! Yiguo_try<br />
| F19_tn21 || SST || 30 || monthly || anom || All(superlayer) || micom_serial || yes || point || no || no || ongoing || ??<br />
|-<br />
! FF_ini_try<br />
| F19_tn21 || SST || 30 || monthly || full || all || micom_serial || yes || point || no || no || Finished || ??<br />
|}<br />
<br />
<br />
== Projects using NorCPM ==<br />
PRACTICE, EPOCASA, PREFACE, INCREASE, PARADIGM<br />
<br />
== Publications, etc. ==<br />
<br />
'''Peer-review'''<br />
<br />
* [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon, F., Bethke, I., Keenlyside, N., Bentsen, M., Bertino, L., & Zheng, F. (2014). Seasonal-to-decadal predictions with the ensemble Kalman filter and the Norwegian Earth System Model: a twin experiment. Tellus A, 66. doi:10.3402/tellusa.v66.21074]<br />
<br />
'''Presentations''' <br />
<br />
* NorCPM talk at the joint MiKlip/Specs meeting in Offenbach 24.-25. Feb 2015 [[Media:BethkeEtAl_MiklipSpecsMeeting2015.pdf|(pdf)]]<br />
<br />
== User Resources ==<br />
<br />
* [[NorCPM User Manual]]<br />
<br />
<br />
== Working group ==<br />
<br />
*[[Meeting minutes of working group ]]<br />
<br />
== Contact informations == <br />
Noel.Keenlyside@gfi.uib.no (leader); ingo.bethke@uni.no (NorESM related question); francois.counillon@nersc.no (EnKF related question); maolin.shen@gfi.uib.no (atmospheric nudging related question)</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=File:BethkeEtAl_MiklipSpecsMeeting2015.pdf&diff=188File:BethkeEtAl MiklipSpecsMeeting2015.pdf2015-03-02T12:33:18Z<p>Ingo: </p>
<hr />
<div></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=149NorCPM User Manual2014-11-05T09:47:13Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
The Norwegian Climate Prediction Model (NorCPM) is aiming at providing prediction from seasonal-to-decadal time scale. It is based on the Norwegian earth system model ([https://wiki.met.no/noresm/start]) and the Ensemble Kalman Filter ([http://en.wikipedia.org/wiki/Ensemble_Kalman_filter]) data assimilation method. NorESM is a state of the art Earth system model that is based on CESM ([http://en.wikipedia.org/wiki/Community_Climate_System_Model]), but that used different Aerosol/chemistry scheme and ocean model ( evolve from the MICOM). The EnKF is a sequential data assimilation method that allows for fully multivariate and flow dependent correct using the covariance matrix from a Monte-carlo model integration.<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5).<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. The main version NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
{| class={wikitable} align="center"<br />
|+ NorESM configurations in NorCPM <br />
|-<br />
! Model acronym <br />
! Ocean <br />
! Atmosphere <br />
! References<br />
|-<br />
| NorESM1-L <br />
| Micom (3.6deg) <br />
| CAM4 (T31) <br />
| [http://www.geosci-model-dev.net/5/523/2012/gmd-5-523-2012.html Zhang et al. 2012], [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon et al. 2014]<br />
|-<br />
| NorESM1-ML <br />
| Micom (2deg) <br />
| CAM4 (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHT <br />
| Micom (2deg) <br />
| CAM4-WACCMSC (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHTC <br />
| Micom (2deg) <br />
| CAM4-WACCM (2deg) <br />
|<br />
|-<br />
| NorESM1-ME <br />
| Micom (1deg) <br />
| CAM4-OSLO (2deg) <br />
| [http://www.geosci-model-dev.net/6/301/2013/gmd-6-301-2013.html Tjiputra et al. 2013] <br />
|}<br />
<br />
=== Ensemble Kalman Filter === <br />
The EnKF is a sequential ensemble based data assimilation method that consists of two steps, a propagation and a correction. The propagation step is a Monte Carlo method. The ensemble spread (i.e. ensemble variability) is used to estimate the forecast error, because they are expected to be related in locations (and times) where (and when) the system is more chaotic. Assuming that the distribution of the error is Gaussian and the model is not biased one can proceed with the tBayesian update and find new estimate of the ensemble mean and model covariance. The method is often called as flow dependent as the covariance matrix evolves with the system and thus provide correction that are in agreement with the state of the system. The method allows fully multivariate updated - meaning that observation of for example SST can be used to apply correction on all other model variables. However one should bear in mind that the update assume linearity, which is not suitable for all variable and that correlation are subject to sampling error. Currently NorCPM uses the Deterministic Ensemble Kalman Filter (DEnKF, Sakov et al. 2008), which is a square root filter version of the EnKF.<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
User-support for NorCPM is currently limited to Norway. <br />
<br />
Step 1: New users need to apply for access to computational and storage resources at the Norwegian Metacenter for Computational Science (link to application page: https://www.notur.no/user-account). NorCPM activities are usually tied to the cpu and storage accounts nn9039k and ns9039k, which are held by Noel Keenlyside (noel.keenlyside[at]gfi.uib.no). NorCPM is currently set up on the computational platform HEXAGON (https://www.notur.no/hardware/hexagon). <br />
<br />
Step 2: After gaining access to HEXAGON, the user needs to contact the local support (support-uib@notur.no) to be added to the unix-groups "noresm" and "nn9039k". <br />
<br />
<br />
=== Installing compiling NorCPM === <br />
To install NorCPM on your account, follow the step:<br />
<br />
1) install NorESM and link the script necessary :<br />
<br />
:''cd ${HOME}''<br />
<br />
:''mkdir -p NorESM''<br />
<br />
:''cd NorESM''<br />
<br />
If you have a NoreSM svn access do:<br />
<br />
:''svn checkout https://svn.met.no/NorESM/noresm/tags/projectEPOCASA-3 projectEPOCASA-3''<br />
<br />
if you don't do:<br />
<br />
:''tar -xvf /work-common/shared/nn9039k/NorCPM/Code/NorESM/projectEPOCASA-3.tar.gz''<br />
<br />
:''mkdir -p Script''<br />
<br />
Now you will use the default Script version<br />
<br />
:''ln -s /work/shared/nn9039k/NorCPM/Script/* .''<br />
<br />
:''rm personal_setting.sh''<br />
<br />
:''cp /work/shared/nn9039k/NorCPM/Script/personal_setting.sh .''<br />
<br />
:''cd ${HOME}/NorESM/''<br />
<br />
:''mkdir -p bin''<br />
<br />
:''cd bin''<br />
<br />
Same with bin, for using the default version link the file. If you want to create your own,<br />
Copy and compile the code in /work-common/shared/nn9039k/NorCPM/Code/EnKF/<br />
delete the link in bin and move your own executable there<br />
<br />
:''ln -sf /work/shared/nn9039k/NorCPM/bin/* .''<br />
<br />
2) Select of a model version and experiment :<br />
<br />
Need to edit ${HOME}/Script/personal_setting.sh to chose a model version, ensemble size, starting date, ...<br />
<br />
Launch the creation of the ensemble structure.<br />
<br />
:''cd ${HOME}/NorESM/Script''<br />
<br />
:''./create_ensemble.sh''<br />
<br />
You structure of ensemble is created, the code compiled and the initial condition copied. You are ready to start your reanalysis.<br />
<br />
=== Model and directory structure === <br />
Shared files on hexagon are located here:<br />
<br />
/work/shared/nn9039k/NorCPM/<br />
<br />
The subfolder:<br />
<br />
:-Code contains source code of all fortran code needed (NorESM, EnKF, Post processing)<br />
<br />
:-Script contains all bash script necessary to run the reanalysis or prediction<br />
<br />
:-Restart contains the initial condition (restart files) for two different configuration of NorESM in 1980-01-15<br />
<br />
:-Obs contains observation that are available for assimilation (SST,SSH)<br />
<br />
:-bin contains compiled executable from the Code subfolder<br />
<br />
:-Input contains input files both for NorESM and EnKF<br />
<br />
:-matlab contains code used for validation purpose<br />
<br />
In your home folder ${HOME}/NorESM/ you have your personal file bin, Script and projectEPOCASA-3 that are copied or linked from the /work/shared<br />
<br />
cases contains the specification of your ensemble of experiment. Each ensemble members have its own separate experiment with limitation of the duplicate.<br />
<br />
=== Option available in NorCPM === <br />
Most of the setting are selected in the file ${HOME}/NorESM/personal_setting.sh <br />
<br />
There is currently two versions of NorESM available: NorCPM_F19_tn21 and NorCPM_ME<br />
<br />
:-NorCPM_F19_tn21 is the default version: It has F19 (about 2 dergree resolution) and uses CAM5 for the atmosphere and 2 degree for the ocean on a tripolar grid. <br />
<br />
:-NorCPM_ME (or f19_g16) is the medium resolution used for CMIP5: It uses CAM-OSLO and has a F19 resolution for the atmosphere (about 2 dergree resolution) and about 1 degree for the ocean (bipolar grid).<br />
<br />
About the type of observation available is OBSTYPE=SST and PRODUCER='HADISST2' (reynolds is also possible)<br />
<br />
You need to decide when your experiment will start and when it will finish (start_date and ENDYEAR)<br />
<br />
You can chose how many member (ensemble size) you want to use. Beware that if you want to use too few members, EnKF would perform badly (don't even try with 1 or 2 ). <br />
<br />
For NorCPM_F19_tn21 and NorCPM_ME there is already an initial ensemble for 1980-01-15 for other starting date please see XXX<br />
<br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Setting up the initialisation ==== <br />
You have different option available. First you may decide if you would like to use Anomaly assimilation or full field assimilation.<br />
This is done when compiling the EnKF code <br />
define the FLAG ANOMALY before compilation in :<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/MODEL.CPP''<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/Prep_Routines/MODEL.CPP''<br />
<br />
To reject observation near the coast, define the FLAG MASK_LANDNEIGHBOUR in:<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/Prep_Routines/MODEL.CPP''<br />
<br />
You can also activate slow initialisation when doing reanalysis by setting RFACTOR=8 in :<br />
''${HOME}/NorESM/personal_setting.sh''<br />
<br />
It will overestimate the observation error by the RFACTOR. (no that RFACTOR is reducing by 2 after each assimilation).<br />
'''NB: If you want to restart your reanalysis that has crashed remember to change it to 1'''<br />
<br />
You can edit the list of variable that assimilation will update (via linear relation):<br />
/work/shared/nn9039k/NorCPM/Input/EnKF/analysisfields.in<br />
Each line describe a model field to be updated:<br />
<br />
If the variable is 3D (x,y,z) the number indicates the layer (in z) that we are updating.<br />
<br />
<br />
<br />
You have a lot of data assimilation parameter in :<br />
''/work/shared/nn9039k/NorCPM/Input/EnKF/enkf.prm_mal''<br />
*method of assimilation you can chose between EnKF and DENKF. The first was is a stochastic filter and the other is a deterministic filter i.e. that it does not perturb observation (See Sakov et al. 2008 for a more thoroughly description).<br />
*ensemble contain the ensemble size ('''TODO make that it matches automatically size of personal setting!!''')<br />
*Localisation is a critical parameter of assimilation. It is an ad-hoc way to limit the impact of observation as a function of the distance to the model grid point. A model grid point ould only be influenced by obs found within the localisation radius (locrad in the prm file and is in km). The larger you localisation radius is the higher degree of freedom you have in your model and the larger the number of member you would need to span it properly.The optimal localisation radius depends on your ensemble size. In NorCPM we are currently only considering single water column update (i.e. locfuntag = "STEP" and locrad = 95). If you want to see the impact of increasing the localisation radius, you can for example use locfuntag = "G&C" and locrad = 600 . Note that the G&C means that the influence will be reduced as a function of the distance by tapering (schur product). 600 km would give an effective radius of ~200 km.<br />
* You also have possibility to play with moderation:<br />
**inflation is a way to artificially inflate you ensemble spread (multiplicative covariance inflation)<br />
**rfactor1 is the way to do a slow assimilation start (It is handle automatically by the main script of the reanalysis<br />
**rfactor2 is a way to artificially overestimate the observation error when updating the covariance matrix (only available with DEnKF)<br />
**kfacor is a pre-screening of the observation. if the obs error and the likelihood of the ensemble and observation do not overlap, you are inflating the obs error (up to a factor 2) in order to gently pull the model towards the truth.<br />
*files<br />
**jmapfname is used to optimise the distribution of CPU when updating the different fields (remove the line if you are not sure)<br />
**pointfname is used to dump all assimilation diagnostic at a specific point.<br />
*prmest<br />
*Here you can also estimate model output by state augmentation (you can estimate evolving model bias as well)<br />
<br />
=== Running the system === <br />
The system must be running on the login node.<br />
it is run by the command:<br />
:''${HOME}/NorESM/Script/main.sh''<br />
It is recommended to run the following command using screen [http://en.wikipedia.org/wiki/GNU_Screen]:<br />
:''screen''<br />
:''${HOME}/NorESM/Script/main.sh''<br />
:''ctrl+a+d" (to quit the screen"<br />
:"screen -r" (to reattach it)<br />
Note that there are 5 available login node on hexagon. Your screen would be only available from the screen you launch it from.<br />
To change from one login node to the other, simply type:<br />
:''ssh login1" (to access the first login node)<br />
<br />
=== How to restart if it crashes === <br />
The system is quite robust, but some crashes may happen (power outage, fork issue, machine slow so that wall time is reached ....)<br />
It is good if you can identify depending on where the system stop (the last line on your screen). <br />
You can then start edit ${HOME}/NorESM/Script/personal_setting.sh and restart from the start_date and the place in the code you want (playing with SKIPASSIM and SKIPPROP)<br />
<br />
<br />
If you are not sure of what has happen or where it has crashed, the first step is to identify when is the last restart file available:<br />
:''ls /work/${USER}/archive/${VERSION}01/rest/''<br />
you can then run the script:<br />
:''${HOME}/NorESM/Script/mv_rst_from_archive_to_run.sh date_to_restart''<br />
Then you need to edit ${HOME}/NorESM/Script/personal_setting.sh:<br />
:adjust the start_date accordingly<br />
:set RFACTOR=1 (no need to slow aswim start)<br />
:skip the first assimilation SKIPASSIM=0 (the restart file in archive have already been assimilated)<br />
<br />
Now you can relaunche the mannish script in a screen.<br />
<br />
=== Customising output === <br />
<br />
=== Setting up atmospheric nudging === <br />
<br />
<br />
=== Initial run === <br />
<br />
=== Continuation of existing run === <br />
<br />
=== Running ensembles as single jobs === <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Compression === <br />
<br />
=== Archiving to NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=148NorCPM User Manual2014-11-05T09:44:56Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
The Norwegian Climate Prediction Model (NorCPM) is aiming at providing prediction from seasonal-to-decadal time scale. It is based on the Norwegian earth system model ([https://wiki.met.no/noresm/start]) and the Ensemble Kalman Filter ([http://en.wikipedia.org/wiki/Ensemble_Kalman_filter]) data assimilation method. NorESM is a state of the art Earth system model that is based on CESM ([http://en.wikipedia.org/wiki/Community_Climate_System_Model]), but that used different Aerosol/chemistry scheme and ocean model ( evolve from the MICOM). The EnKF is a sequential data assimilation method that allows for fully multivariate and flow dependent correct using the covariance matrix from a Monte-carlo model integration.<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5).<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. The main version NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
{| class={wikitable} align="center"<br />
|+ NorESM configurations in NorCPM <br />
|-<br />
! Model acronym <br />
! Ocean <br />
! Atmosphere <br />
! References<br />
|-<br />
| NorESM1-L <br />
| Micom (3.6deg) <br />
| CAM4 (T31) <br />
| [http://www.geosci-model-dev.net/5/523/2012/gmd-5-523-2012.html Zhang et al. 2012], [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon et al. 2014]<br />
|-<br />
| NorESM1-ML <br />
| Micom (2deg) <br />
| CAM4 (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHT <br />
| Micom (2deg) <br />
| CAM4-WACCMSC (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHTC <br />
| Micom (2deg) <br />
| CAM4-WACCM (2deg) <br />
|<br />
|-<br />
| NorESM1-ME <br />
| Micom (1deg) <br />
| CAM4-OSLO (2deg) <br />
| [http://www.geosci-model-dev.net/6/301/2013/gmd-6-301-2013.html Tjiputra et al. 2013] <br />
|}<br />
<br />
=== Ensemble Kalman Filter === <br />
The EnKF is a sequential ensemble based data assimilation method that consists of two steps, a propagation and a correction. The propagation step is a Monte Carlo method. The ensemble spread (i.e. ensemble variability) is used to estimate the forecast error, because they are expected to be related in locations (and times) where (and when) the system is more chaotic. Assuming that the distribution of the error is Gaussian and the model is not biased one can proceed with the tBayesian update and find new estimate of the ensemble mean and model covariance. The method is often called as flow dependent as the covariance matrix evolves with the system and thus provide correction that are in agreement with the state of the system. The method allows fully multivariate updated - meaning that observation of for example SST can be used to apply correction on all other model variables. However one should bear in mind that the update assume linearity, which is not suitable for all variable and that correlation are subject to sampling error. Currently NorCPM uses the Deterministic Ensemble Kalman Filter (DEnKF, Sakov et al. 2008), which is a square root filter version of the EnKF.<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
User-support for NorCPM is currently limited to Norway. <br />
<br />
Step 1: New users need to apply for access to computational and storage resources at the Norwegian Metacenter for Computational Science (link to application page: https://www.notur.no/user-account). NorCPM activities are usually tied to the cpu and storage accounts nn9039k and ns9039k, which are held by Noel Keenlyside (noel.keenlyside[at]gfi.uib.no). NorCPM is currently set up on the computational platform HEXAGON (https://www.notur.no/hardware/hexagon). <br />
<br />
Step 2: After gaining access to HEXAGON, the user needs to contact the local support (support-uib@notur.no) to be added to the unix-groups "noresm" and "nn9039k". <br />
<br />
<br />
=== Installing compiling NorCPM === <br />
To install NorCPM on your account, follow the step:<br />
<br />
1) install NorESM and link the script necessary :<br />
<br />
:''cd ${HOME}''<br />
<br />
:''mkdir -p NorESM''<br />
<br />
:''cd NorESM''<br />
<br />
If you have a NoreSM svn access do:<br />
<br />
:''svn checkout https://svn.met.no/NorESM/noresm/tags/projectEPOCASA-3 projectEPOCASA-3''<br />
<br />
if you don't do:<br />
<br />
:''tar -xvf /work-common/shared/nn9039k/NorCPM/Code/NorESM/projectEPOCASA-3.tar.gz''<br />
<br />
:''mkdir -p Script''<br />
<br />
Now you will use the default Script version<br />
<br />
:''ln -s /work/shared/nn9039k/NorCPM/Script/* .''<br />
<br />
:''rm personal_setting.sh''<br />
<br />
:''cp /work/shared/nn9039k/NorCPM/Script/personal_setting.sh .''<br />
<br />
:''cd ${HOME}/NorESM/''<br />
<br />
:''mkdir -p bin''<br />
<br />
:''cd bin''<br />
<br />
Same with bin, for using the default version link the file. If you want to create your own,<br />
Copy and compile the code in /work-common/shared/nn9039k/NorCPM/Code/EnKF/<br />
delete the link in bin and move your own executable there<br />
<br />
:''ln -sf /work/shared/nn9039k/NorCPM/bin/* .''<br />
<br />
2) Select of a model version and experiment :<br />
<br />
Need to edit ${HOME}/Script/personal_setting.sh to chose a model version, ensemble size, starting date, ...<br />
<br />
Launch the creation of the ensemble structure.<br />
<br />
:''cd ${HOME}/NorESM/Script''<br />
<br />
:''./create_ensemble.sh''<br />
<br />
You structure of ensemble is created, the code compiled and the initial condition copied. You are ready to start your reanalysis.<br />
<br />
=== Model and directory structure === <br />
Shared files on hexagon are located here:<br />
<br />
/work/shared/nn9039k/NorCPM/<br />
<br />
The subfolder:<br />
<br />
:-Code contains source code of all fortran code needed (NorESM, EnKF, Post processing)<br />
<br />
:-Script contains all bash script necessary to run the reanalysis or prediction<br />
<br />
:-Restart contains the initial condition (restart files) for two different configuration of NorESM in 1980-01-15<br />
<br />
:-Obs contains observation that are available for assimilation (SST,SSH)<br />
<br />
:-bin contains compiled executable from the Code subfolder<br />
<br />
:-Input contains input files both for NorESM and EnKF<br />
<br />
:-matlab contains code used for validation purpose<br />
<br />
In your home folder ${HOME}/NorESM/ you have your personal file bin, Script and projectEPOCASA-3 that are copied or linked from the /work/shared<br />
<br />
cases contains the specification of your ensemble of experiment. Each ensemble members have its own separate experiment with limitation of the duplicate.<br />
<br />
=== Option available in NorCPM === <br />
Most of the setting are selected in the file ${HOME}/NorESM/personal_setting.sh <br />
<br />
There is currently two versions of NorESM available: NorCPM_F19_tn21 and NorCPM_ME<br />
<br />
:-NorCPM_F19_tn21 is the default version: It has F19 (about 2 dergree resolution) and uses CAM5 for the atmosphere and 2 degree for the ocean on a tripolar grid. <br />
<br />
:-NorCPM_ME (or f19_g16) is the medium resolution used for CMIP5: It uses CAM-OSLO and has a F19 resolution for the atmosphere (about 2 dergree resolution) and about 1 degree for the ocean (bipolar grid).<br />
<br />
About the type of observation available is OBSTYPE=SST and PRODUCER='HADISST2' (reynolds is also possible)<br />
<br />
You need to decide when your experiment will start and when it will finish (start_date and ENDYEAR)<br />
<br />
You can chose how many member (ensemble size) you want to use. Beware that if you want to use too few members, EnKF would perform badly (don't even try with 1 or 2 ). <br />
<br />
For NorCPM_F19_tn21 and NorCPM_ME there is already an initial ensemble for 1980-01-15 for other starting date please see XXX<br />
<br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
You have different option available. First you may decide if you would like to use Anomaly assimilation or full field assimilation.<br />
This is done when compiling the EnKF code <br />
define the FLAG ANOMALY before compilation in :<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/MODEL.CPP''<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/Prep_Routines/MODEL.CPP''<br />
<br />
To reject observation near the coast, define the FLAG MASK_LANDNEIGHBOUR in:<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/Prep_Routines/MODEL.CPP''<br />
<br />
You can also activate slow initialisation when doing reanalysis by setting RFACTOR=8 in :<br />
''${HOME}/NorESM/personal_setting.sh''<br />
<br />
It will overestimate the observation error by the RFACTOR. (no that RFACTOR is reducing by 2 after each assimilation).<br />
'''NB: If you want to restart your reanalysis that has crashed remember to change it to 1'''<br />
<br />
You can edit the list of variable that assimilation will update (via linear relation):<br />
/work/shared/nn9039k/NorCPM/Input/EnKF/analysisfields.in<br />
Each line describe a model field to be updated:<br />
<br />
If the variable is 3D (x,y,z) the number indicates the layer (in z) that we are updating.<br />
<br />
<br />
<br />
You have a lot of data assimilation parameter in :<br />
''/work/shared/nn9039k/NorCPM/Input/EnKF/enkf.prm_mal''<br />
*method of assimilation you can chose between EnKF and DENKF. The first was is a stochastic filter and the other is a deterministic filter i.e. that it does not perturb observation (See Sakov et al. 2008 for a more thoroughly description).<br />
*ensemble contain the ensemble size ('''TODO make that it matches automatically size of personal setting!!''')<br />
*Localisation is a critical parameter of assimilation. It is an ad-hoc way to limit the impact of observation as a function of the distance to the model grid point. A model grid point ould only be influenced by obs found within the localisation radius (locrad in the prm file and is in km). The larger you localisation radius is the higher degree of freedom you have in your model and the larger the number of member you would need to span it properly.The optimal localisation radius depends on your ensemble size. In NorCPM we are currently only considering single water column update (i.e. locfuntag = "STEP" and locrad = 95). If you want to see the impact of increasing the localisation radius, you can for example use locfuntag = "G&C" and locrad = 600 . Note that the G&C means that the influence will be reduced as a function of the distance by tapering (schur product). 600 km would give an effective radius of ~200 km.<br />
* You also have possibility to play with moderation:<br />
**inflation is a way to artificially inflate you ensemble spread (multiplicative covariance inflation)<br />
**rfactor1 is the way to do a slow assimilation start (It is handle automatically by the main script of the reanalysis<br />
**rfactor2 is a way to artificially overestimate the observation error when updating the covariance matrix (only available with DEnKF)<br />
**kfacor is a pre-screening of the observation. if the obs error and the likelihood of the ensemble and observation do not overlap, you are inflating the obs error (up to a factor 2) in order to gently pull the model towards the truth.<br />
*files<br />
**jmapfname is used to optimise the distribution of CPU when updating the different fields (remove the line if you are not sure)<br />
**pointfname is used to dump all assimilation diagnostic at a specific point.<br />
*prmest<br />
*Here you can also estimate model output by state augmentation (you can estimate evolving model bias as well)<br />
=== Running the system === <br />
The system must be running on the login node.<br />
it is run by the command:<br />
:''${HOME}/NorESM/Script/main.sh''<br />
It is recommended to run the following command using screen [http://en.wikipedia.org/wiki/GNU_Screen]:<br />
:''screen''<br />
:''${HOME}/NorESM/Script/main.sh''<br />
:''ctrl+a+d" (to quit the screen"<br />
:"screen -r" (to reattach it)<br />
Note that there are 5 available login node on hexagon. Your screen would be only available from the screen you launch it from.<br />
To change from one login node to the other, simply type:<br />
:''ssh login1" (to access the first login node)<br />
<br />
=== How to restart if it crashes === <br />
The system is quite robust, but some crashes may happen (power outage, fork issue, machine slow so that wall time is reached ....)<br />
It is good if you can identify depending on where the system stop (the last line on your screen). <br />
You can then start edit ${HOME}/NorESM/Script/personal_setting.sh and restart from the start_date and the place in the code you want (playing with SKIPASSIM and SKIPPROP)<br />
<br />
<br />
If you are not sure of what has happen or where it has crashed, the first step is to identify when is the last restart file available:<br />
:''ls /work/${USER}/archive/${VERSION}01/rest/''<br />
you can then run the script:<br />
:''${HOME}/NorESM/Script/mv_rst_from_archive_to_run.sh date_to_restart''<br />
Then you need to edit ${HOME}/NorESM/Script/personal_setting.sh:<br />
:adjust the start_date accordingly<br />
:set RFACTOR=1 (no need to slow aswim start)<br />
:skip the first assimilation SKIPASSIM=0 (the restart file in archive have already been assimilated)<br />
<br />
Now you can relaunche the mannish script in a screen.<br />
<br />
=== Customising output === <br />
<br />
=== Setting up atmospheric nudging === <br />
<br />
<br />
=== Initial run === <br />
<br />
=== Continuation of existing run === <br />
<br />
=== Running ensembles as single jobs === <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Compression === <br />
<br />
=== Archiving to NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=147NorCPM User Manual2014-11-05T09:44:01Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
The Norwegian Climate Prediction Model (NorCPM) is aiming at providing prediction from seasonal-to-decadal time scale. It is based on the Norwegian earth system model ([https://wiki.met.no/noresm/start]) and the Ensemble Kalman Filter ([http://en.wikipedia.org/wiki/Ensemble_Kalman_filter]) data assimilation method. NorESM is a state of the art Earth system model that is based on CESM ([http://en.wikipedia.org/wiki/Community_Climate_System_Model]), but that used different Aerosol/chemistry scheme and ocean model ( evolve from the MICOM). The EnKF is a sequential data assimilation method that allows for fully multivariate and flow dependent correct using the covariance matrix from a Monte-carlo model integration.<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5).<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. The main version NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
{| class={wikitable} align="center"<br />
|+ NorESM configurations in NorCPM <br />
|-<br />
! Model acronym <br />
! Ocean <br />
! Atmosphere <br />
! References<br />
|-<br />
| NorESM1-L <br />
| Micom (3.6deg) <br />
| CAM4 (T31) <br />
| [http://www.geosci-model-dev.net/5/523/2012/gmd-5-523-2012.html Zhang et al. 2012], [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon et al. 2014]<br />
|-<br />
| NorESM1-ML <br />
| Micom (2deg) <br />
| CAM4 (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHT <br />
| Micom (2deg) <br />
| CAM4-WACCMSC (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHTC <br />
| Micom (2deg) <br />
| CAM4-WACCM (2deg) <br />
|<br />
|-<br />
| NorESM1-ME <br />
| Micom (1deg) <br />
| CAM4-OSLO (2deg) <br />
| [http://www.geosci-model-dev.net/6/301/2013/gmd-6-301-2013.html Tjiputra et al. 2013] <br />
|}<br />
<br />
=== Ensemble Kalman Filter === <br />
The EnKF is a sequential ensemble based data assimilation method that consists of two steps, a propagation and a correction. The propagation step is a Monte Carlo method. The ensemble spread (i.e. ensemble variability) is used to estimate the forecast error, because they are expected to be related in locations (and times) where (and when) the system is more chaotic. Assuming that the distribution of the error is Gaussian and the model is not biased one can proceed with the tBayesian update and find new estimate of the ensemble mean and model covariance. The method is often called as flow dependent as the covariance matrix evolves with the system and thus provide correction that are in agreement with the state of the system. The method allows fully multivariate updated - meaning that observation of for example SST can be used to apply correction on all other model variables. However one should bear in mind that the update assume linearity, which is not suitable for all variable and that correlation are subject to sampling error. Currently NorCPM uses the Deterministic Ensemble Kalman Filter (DEnKF, Sakov et al. 2008), which is a square root filter version of the EnKF.<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
User-support for NorCPM is currently limited to Norway. <br />
<br />
Step 1: New users need to apply for access to computational and storage resources at the Norwegian Metacenter for Computational Science (link to application page: https://www.notur.no/user-account). NorCPM activities are usually tied to the cpu and storage accounts nn9039k and ns9039k, which are held by Noel Keenlyside (noel.keenlyside[at]gfi.uib.no). NorCPM is currently set up on the computational platform HEXAGON (https://www.notur.no/hardware/hexagon). <br />
<br />
Step 2: After gaining access to HEXAGON, the user needs to contact the local support (support-uib@notur.no) to be added to the unix-groups "noresm" and "nn9039k". <br />
<br />
<br />
=== Installing compiling NorCPM === <br />
To install NorCPM on your account, follow the step:<br />
<br />
1) install NorESM and link the script necessary :<br />
<br />
:''cd ${HOME}''<br />
<br />
:''mkdir -p NorESM''<br />
<br />
:''cd NorESM''<br />
<br />
If you have a NoreSM svn access do:<br />
<br />
:''svn checkout https://svn.met.no/NorESM/noresm/tags/projectEPOCASA-3 projectEPOCASA-3''<br />
<br />
if you don't do:<br />
<br />
:''tar -xvf /work-common/shared/nn9039k/NorCPM/Code/NorESM/projectEPOCASA-3.tar.gz''<br />
<br />
:''mkdir -p Script''<br />
<br />
Now you will use the default Script version<br />
<br />
:''ln -s /work/shared/nn9039k/NorCPM/Script/* .''<br />
<br />
:''rm personal_setting.sh''<br />
<br />
:''cp /work/shared/nn9039k/NorCPM/Script/personal_setting.sh .''<br />
<br />
:''cd ${HOME}/NorESM/''<br />
<br />
:''mkdir -p bin''<br />
<br />
:''cd bin''<br />
<br />
Same with bin, for using the default version link the file. If you want to create your own,<br />
Copy and compile the code in /work-common/shared/nn9039k/NorCPM/Code/EnKF/<br />
delete the link in bin and move your own executable there<br />
<br />
:''ln -sf /work/shared/nn9039k/NorCPM/bin/* .''<br />
<br />
2) Select of a model version and experiment :<br />
<br />
Need to edit ${HOME}/Script/personal_setting.sh to chose a model version, ensemble size, starting date, ...<br />
<br />
Launch the creation of the ensemble structure.<br />
<br />
:''cd ${HOME}/NorESM/Script''<br />
<br />
:''./create_ensemble.sh''<br />
<br />
You structure of ensemble is created, the code compiled and the initial condition copied. You are ready to start your reanalysis.<br />
<br />
=== Model and directory structure === <br />
Shared files on hexagon are located here:<br />
<br />
/work/shared/nn9039k/NorCPM/<br />
<br />
The subfolder:<br />
<br />
:-Code contains source code of all fortran code needed (NorESM, EnKF, Post processing)<br />
<br />
:-Script contains all bash script necessary to run the reanalysis or prediction<br />
<br />
:-Restart contains the initial condition (restart files) for two different configuration of NorESM in 1980-01-15<br />
<br />
:-Obs contains observation that are available for assimilation (SST,SSH)<br />
<br />
:-bin contains compiled executable from the Code subfolder<br />
<br />
:-Input contains input files both for NorESM and EnKF<br />
<br />
:-matlab contains code used for validation purpose<br />
<br />
In your home folder ${HOME}/NorESM/ you have your personal file bin, Script and projectEPOCASA-3 that are copied or linked from the /work/shared<br />
<br />
cases contains the specification of your ensemble of experiment. Each ensemble members have its own separate experiment with limitation of the duplicate.<br />
<br />
=== Option available in NorCPM === <br />
Most of the setting are selected in the file ${HOME}/NorESM/personal_setting.sh <br />
<br />
There is currently two versions of NorESM available: NorCPM_F19_tn21 and NorCPM_ME<br />
<br />
:-NorCPM_F19_tn21 is the default version: It has F19 (about 2 dergree resolution) and uses CAM5 for the atmosphere and 2 degree for the ocean on a tripolar grid. <br />
<br />
:-NorCPM_ME (or f19_g16) is the medium resolution used for CMIP5: It uses CAM-OSLO and has a F19 resolution for the atmosphere (about 2 dergree resolution) and about 1 degree for the ocean (bipolar grid).<br />
<br />
About the type of observation available is OBSTYPE=SST and PRODUCER='HADISST2' (reynolds is also possible)<br />
<br />
You need to decide when your experiment will start and when it will finish (start_date and ENDYEAR)<br />
<br />
You can chose how many member (ensemble size) you want to use. Beware that if you want to use too few members, EnKF would perform badly (don't even try with 1 or 2 ). <br />
<br />
For NorCPM_F19_tn21 and NorCPM_ME there is already an initial ensemble for 1980-01-15 for other starting date please see XXX<br />
<br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
You have different option available. First you may decide if you would like to use Anomaly assimilation or full field assimilation.<br />
This is done when compiling the EnKF code <br />
define the FLAG ANOMALY before compilation in :<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/MODEL.CPP''<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/Prep_Routines/MODEL.CPP''<br />
<br />
To reject observation near the coast, define the FLAG MASK_LANDNEIGHBOUR in:<br />
*''/work/shared/nn9039k/NorCPM/Code/EnKF-MPI-TOPAZ/Prep_Routines/MODEL.CPP''<br />
<br />
You can also activate slow initialisation when doing reanalysis by setting RFACTOR=8 in :<br />
''${HOME}/NorESM/personal_setting.sh''<br />
<br />
It will overestimate the observation error by the RFACTOR. (no that RFACTOR is reducing by 2 after each assimilation).<br />
'''NB: If you want to restart your reanalysis that has crashed remember to change it to 1'''<br />
<br />
You can edit the list of variable that assimilation will update (via linear relation):<br />
/work/shared/nn9039k/NorCPM/Input/EnKF/analysisfields.in<br />
Each line describe a model field to be updated:<br />
<br />
If the variable is 3D (x,y,z) the number indicates the layer (in z) that we are updating.<br />
<br />
<br />
<br />
You have a lot of data assimilation parameter in :<br />
''/work/shared/nn9039k/NorCPM/Input/EnKF/enkf.prm_mal''<br />
*method of assimilation you can chose between EnKF and DENKF. The first was is a stochastic filter and the other is a deterministic filter i.e. that it does not perturb observation (See Sakov et al. 2008 for a more thoroughly description).<br />
*ensemble contain the ensemble size ('''TODO make that it matches automatically size of personal setting!!''')<br />
*Localisation is a critical parameter of assimilation. It is an ad-hoc way to limit the impact of observation as a function of the distance to the model grid point. A model grid point ould only be influenced by obs found within the localisation radius (locrad in the prm file and is in km). The larger you localisation radius is the higher degree of freedom you have in your model and the larger the number of member you would need to span it properly.The optimal localisation radius depends on your ensemble size. In NorCPM we are currently only considering single water column update (i.e. locfuntag = "STEP" and locrad = 95). If you want to see the impact of increasing the localisation radius, you can for example use locfuntag = "G&C" and locrad = 600 . Note that the G&C means that the influence will be reduced as a function of the distance by tapering (schur product). 600 km would give an effective radius of ~200 km.<br />
* You also have possibility to play with moderation:<br />
**inflation is a way to artificially inflate you ensemble spread (multiplicative covariance inflation)<br />
**rfactor1 is the way to do a slow assimilation start (It is handle automatically by the main script of the reanalysis<br />
**rfactor2 is a way to artificially overestimate the observation error when updating the covariance matrix (only available with DEnKF)<br />
**kfacor is a pre-screening of the observation. if the obs error and the likelihood of the ensemble and observation do not overlap, you are inflating the obs error (up to a factor 2) in order to gently pull the model towards the truth.<br />
*files<br />
**jmapfname is used to optimise the distribution of CPU when updating the different fields (remove the line if you are not sure)<br />
**pointfname is used to dump all assimilation diagnostic at a specific point.<br />
*prmest<br />
*Here you can also estimate model output by state augmentation (you can estimate evolving model bias as well)<br />
=== Running the system === <br />
The system must be running on the login node.<br />
it is run by the command:<br />
:''${HOME}/NorESM/Script/main.sh''<br />
It is recommended to run the following command using screen [http://en.wikipedia.org/wiki/GNU_Screen]:<br />
:''screen''<br />
:''${HOME}/NorESM/Script/main.sh''<br />
:''ctrl+a+d" (to quit the screen"<br />
:"screen -r" (to reattach it)<br />
Note that there are 5 available login node on hexagon. Your screen would be only available from the screen you launch it from.<br />
To change from one login node to the other, simply type:<br />
:''ssh login1" (to access the first login node)<br />
<br />
=== How to restart if it crashes === <br />
The system is quite robust, but some crashes may happen (power outage, fork issue, machine slow so that wall time is reached ....)<br />
It is good if you can identify depending on where the system stop (the last line on your screen). <br />
You can then start edit ${HOME}/NorESM/Script/personal_setting.sh and restart from the start_date and the place in the code you want (playing with SKIPASSIM and SKIPPROP)<br />
<br />
<br />
If you are not sure of what has happen or where it has crashed, the first step is to identify when is the last restart file available:<br />
:''ls /work/${USER}/archive/${VERSION}01/rest/''<br />
you can then run the script:<br />
:''${HOME}/NorESM/Script/mv_rst_from_archive_to_run.sh date_to_restart''<br />
Then you need to edit ${HOME}/NorESM/Script/personal_setting.sh:<br />
:adjust the start_date accordingly<br />
:set RFACTOR=1 (no need to slow aswim start)<br />
:skip the first assimilation SKIPASSIM=0 (the restart file in archive have already been assimilated)<br />
<br />
Now you can relaunche the mannish script in a screen.<br />
<br />
=== Customising output === <br />
<br />
=== Setting up atmospheric nudging === <br />
<br />
<br />
=== Initial run === <br />
<br />
=== Continuation of existing run === <br />
<br />
=== Running ensembles as single jobs === <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output on NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=129NorCPM User Manual2014-10-31T15:39:40Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5).<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. The main version NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
{| class={wikitable} align="center"<br />
|+ NorESM configurations in NorCPM <br />
|-<br />
! Model acronym <br />
! Ocean <br />
! Atmosphere <br />
! References<br />
|-<br />
| NorESM1-L <br />
| Micom (3.6deg) <br />
| CAM4 (T31) <br />
| [http://www.geosci-model-dev.net/5/523/2012/gmd-5-523-2012.html Zhang et al. 2012], [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon et al. 2014]<br />
|-<br />
| NorESM1-ML <br />
| Micom (2deg) <br />
| CAM4 (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHT <br />
| Micom (2deg) <br />
| CAM4-WACCMSC (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHTC <br />
| Micom (2deg) <br />
| CAM4-WACCM (2deg) <br />
|<br />
|-<br />
| NorESM1-ME <br />
| Micom (1deg) <br />
| CAM4-OSLO (2deg) <br />
| [http://www.geosci-model-dev.net/6/301/2013/gmd-6-301-2013.html Tjiputra et al. 2013] <br />
|}<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
User-support for NorCPM is currently limited to Norway. <br />
<br />
Step 1: New users need to apply for access to computational and storage resources at the Norwegian Metacenter for Computational Science (link to application page: https://www.notur.no/user-account). NorCPM activities are usually tied to the cpu and storage accounts nn9039k and ns9039k, which are held by Noel Keenlyside (noel.keenlyside[at]gfi.uib.no). NorCPM is currently set up on the computational platform HEXAGON (https://www.notur.no/hardware/hexagon). <br />
<br />
Step 2: After gaining access to HEXAGON, the user needs to contact the local support (support-uib@notur.no) to be added to the unix-groups "noresm" and "nn9039k". <br />
<br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
==== Setting up atmospheric nudging ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output on NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=128NorCPM User Manual2014-10-31T14:33:22Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5).<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. The main version NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
{| class={wikitable} align="center"<br />
|+ NorESM configurations in NorCPM <br />
|-<br />
! Model acronym <br />
! Ocean <br />
! Atmosphere <br />
! References<br />
|-<br />
| NorESM1-L <br />
| Micom (3.6deg) <br />
| CAM4 (T31) <br />
| [http://www.geosci-model-dev.net/5/523/2012/gmd-5-523-2012.html Zhang et al. 2012], [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon et al. 2014]<br />
|-<br />
| NorESM1-ML <br />
| Micom (2deg) <br />
| CAM4 (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHT <br />
| Micom (2deg) <br />
| CAM4-WACCMSC (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHTC <br />
| Micom (2deg) <br />
| CAM4-WACCM (2deg) <br />
|<br />
|-<br />
| NorESM1-ME <br />
| Micom (1deg) <br />
| CAM4-OSLO (2deg) <br />
| [http://www.geosci-model-dev.net/6/301/2013/gmd-6-301-2013.html Tjiputra et al. 2013] <br />
|}<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
==== Setting up atmospheric nudging ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output on NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=127NorCPM User Manual2014-10-31T14:31:43Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5).<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
{| class={wikitable} align="center"<br />
|+ NorESM configurations in NorCPM <br />
|-<br />
! Model acronym <br />
! Ocean <br />
! Atmosphere <br />
! References<br />
|-<br />
| NorESM1-L <br />
| Micom (3.6deg) <br />
| CAM4 (T31) <br />
| [http://www.geosci-model-dev.net/5/523/2012/gmd-5-523-2012.html Zhang et al. 2012], [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon et al. 2014]<br />
|-<br />
| NorESM1-ML <br />
| Micom (2deg) <br />
| CAM4 (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHT <br />
| Micom (2deg) <br />
| CAM4-WACCMSC (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHTC <br />
| Micom (2deg) <br />
| CAM4-WACCM (2deg) <br />
|<br />
|-<br />
| NorESM1-ME <br />
| Micom (1deg) <br />
| CAM4-OSLO (2deg) <br />
| [http://www.geosci-model-dev.net/6/301/2013/gmd-6-301-2013.html Tjiputra et al. 2013] <br />
|}<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
==== Setting up atmospheric nudging ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output on NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=126NorCPM User Manual2014-10-31T14:25:48Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5).<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
{| class={wikitable} align="center"<br />
|+ NorESM configurations in NorCPM <br />
|-<br />
! Model acronym <br />
! Ocean <br />
! Atmosphere <br />
! Reference<br />
|-<br />
| NorESM1-L <br />
| Micom (3.6deg) <br />
| CAM4 (T31) <br />
| Zhang, Counillon<br />
|-<br />
| NorESM1-ML <br />
| Micom (2deg) <br />
| CAM4 (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHT <br />
| Micom (2deg) <br />
| CAM4-WACCMSC (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHTC <br />
| Micom (2deg) <br />
| CAM4-WACCM (2deg) <br />
|<br />
|-<br />
| NorESM1-ME <br />
| Micom (1deg) <br />
| CAM4-OSLO (2deg) <br />
| Tjiputra <br />
|}<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
==== Setting up atmospheric nudging ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output on NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=125NorCPM User Manual2014-10-31T14:24:13Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5). The development of the NorESM started under the now finalized research project NorClim (http://www.norclim.no) and is continued as part of the ongoing EarthClim project (http://gfi.uib.no/EarthClim). EarthClim has eight partners: Uni Research AS (coordinator); 
Bjerknes Centre at the University of Bergen; CICERO Center for Intern Climate and Environmental Research; Norwegian Meteorological Institute; Department of Geosciences, University of Oslo; Norwegian Computing Center; Norwegian Institute for Air Research; and Norwegian Polar Institute, of which the Norwegian Meteorological Institute and the Bjerknes Centre have the main responsibility for the model development. The organizational framework for NorESM is the virtual Norwegian Climate Centre (NCC) consisting of nine of the ten institutions participating in EarthClim.<br />
<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
{| class={wikitable} align="center"<br />
|+ NorESM configurations in NorCPM <br />
|-<br />
! Model acronym <br />
! Ocean <br />
! Atmosphere <br />
! Reference<br />
|-<br />
| NorESM1-L <br />
| Micom (3.6deg) <br />
| CAM4 (T31) <br />
| Zhang, Counillon<br />
|-<br />
| NorESM1-ML <br />
| Micom (2deg) <br />
| CAM4 (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHT <br />
| Micom (2deg) <br />
| CAM4-WACCMSC (2deg) <br />
| <br />
|-<br />
| NorESM1-MLHTC <br />
| Micom (2deg) <br />
| CAM4-WACCM (2deg) <br />
|<br />
|-<br />
| NorESM1-ME <br />
| Micom (1deg) <br />
| CAM4-OSLO (2deg) <br />
| Tjiputra <br />
|}<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
==== Setting up atmospheric nudging ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output on NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=124NorCPM User Manual2014-10-31T14:07:10Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
The Norwegian Earth System Model (NorESM) is one out of ~20 climate models that has produced output for the CMIP5 (http://cmip-pcmdi.llnl.gov/cmip5). The CMIP5 project provides a framework for coordinated climate change experiments for the next five years and includes simulations that will be used in the upcoming Fifth Assessment Report of the IPCC (http://www.ipcc.ch), due 2013/14. The development of the NorESM started under the now finalized research project NorClim (http://www.norclim.no) and is continued as part of the ongoing EarthClim project (http://gfi.uib.no/EarthClim). EarthClim has eight partners: Uni Research AS (coordinator); 
Bjerknes Centre at the University of Bergen; CICERO Center for Intern Climate and Environmental Research; Norwegian Meteorological Institute; Department of Geosciences, University of Oslo; Norwegian Computing Center; Norwegian Institute for Air Research; and Norwegian Polar Institute, of which the Norwegian Meteorological Institute and the Bjerknes Centre have the main responsibility for the model development. The organizational framework for NorESM is the virtual Norwegian Climate Centre (NCC) consisting of nine of the ten institutions participating in EarthClim.<br />
<br />
The NorESM-family of models are based on the Community Climate System Model version 4 (CCSM4) of the University Corporation for Atmospheric Research, but differs from the latter by, in particular, an isopycnic coordinate ocean model and advanced chemistry-aerosol-cloud-radiation interaction schemes. NorESM1-M has a horizontal resolution of approximately 2deg for the atmosphere and land components and 1deg for the ocean and ice components. NorESM is also available in a lower resolution version (NorESM1-L), a medium-low resolution version (NorESM1-ML), a high-top version with specified and full chemistry (NorESM1-MLHT and NorESM1-MLHTC) and a version that includes prognostic biogeochemical cycling (NorESM1-ME).<br />
<br />
NorESM1-L <br />
NorESM1-ML <br />
NorESM1-MLHT<br />
NorESM1-MLHTC <br />
NorESM1-M <br />
<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
==== Setting up atmospheric nudging ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output on NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=119NorCPM User Manual2014-10-24T15:02:45Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuring the initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
==== Setting up atmospheric nudging ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output on NorStore === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_sandbox&diff=80Wiki sandbox2014-09-23T09:16:08Z<p>Ingo: </p>
<hr />
<div>This page is meant for testing and playing around with the wiki functionality. Click on "Edit" in top menu to get started.</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_sandbox&diff=79Wiki sandbox2014-09-23T09:15:48Z<p>Ingo: </p>
<hr />
<div>This page is meant for testing and playing around with the wiki functionality. To get started, click on "Edit" in top menu.</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=78Wiki development2014-09-23T09:14:55Z<p>Ingo: </p>
<hr />
<div><!-- <br />
Guidelines for this wiki: <br />
* The official wiki pages should be complete and fully functional at all times (i.e., clean of stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
--><br />
<br />
'''Test out wiki functionality in our [[Wiki sandbox]].''' <br />
<br />
Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' to enclose ''italic'' text and three times ' to enclose '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use single [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=77Wiki development2014-09-23T09:14:40Z<p>Ingo: </p>
<hr />
<div><!-- <br />
Guidelines for this wiki: <br />
* The official wiki pages should be complete and fully functional at all times (i.e., clean of stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
--><br />
<br />
'''Test out wiki functionality in our [[Wiki sandbox]].''' <br />
<br />
<br />
Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' to enclose ''italic'' text and three times ' to enclose '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use single [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=76Wiki development2014-09-23T09:14:17Z<p>Ingo: </p>
<hr />
<div><!-- <br />
Guidelines for this wiki: <br />
* The official wiki pages should be complete and fully functional at all times (i.e., clean of stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
--><br />
<br />
Test out wiki functionality in our [[Wiki sandbox]]. <br />
<br />
<br />
Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' to enclose ''italic'' text and three times ' to enclose '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use single [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_sandbox&diff=75Wiki sandbox2014-09-23T09:11:42Z<p>Ingo: Created page with "This page is meant for testing and playing around with the wiki functionality..."</p>
<hr />
<div>This page is meant for testing and playing around with the wiki functionality...</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Talk:NorCPM_User_Manual&diff=74Talk:NorCPM User Manual2014-09-23T09:10:13Z<p>Ingo: </p>
<hr />
<div>I have tried to set up a structure for a user guide. This structure is by no means fixed and it might take some iterations to find the right structure for the guide. <br />
<br />
Please feel free to change/add sections and content. Use the discussion function of the wiki to share your ideas and feedback (click on "add topic" to start a new discussion issue).<br />
<br />
Ingo</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Talk:NorCPM_User_Manual&diff=73Talk:NorCPM User Manual2014-09-23T09:09:18Z<p>Ingo: Created page with "I have tried to set up a structure for a user guide. This structure is by no means fixed and we might need some iterations to find the right structure for the guide. Please..."</p>
<hr />
<div>I have tried to set up a structure for a user guide. This structure is by no means fixed and we might need some iterations to find the right structure for the guide. <br />
<br />
Please feel free to change/add sections and content. Use the discussion function of the wiki to share your ideas and feedback (click on "add topic" to start a new discussion issue).<br />
<br />
Ingo</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Talk:Norwegian_Climate_Prediction_Model&diff=72Talk:Norwegian Climate Prediction Model2014-09-23T09:04:29Z<p>Ingo: </p>
<hr />
<div>This is a first try for a layout of our NorCPM wiki. <br />
<br />
Please feel free to change/add sections and content. <br />
<br />
You can use the discussion function of the wiki to share your ideas and feedback (click on "add topic" to start a new discussion issue).<br />
<br />
Have fun :) <br />
<br />
Ingo</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Talk:Norwegian_Climate_Prediction_Model&diff=71Talk:Norwegian Climate Prediction Model2014-09-23T09:03:55Z<p>Ingo: </p>
<hr />
<div>This is a first try for a layout of our NorCPM wiki. <br />
<br />
Please feel free to change/add sections and content. <br />
<br />
Use the discussion function of the wiki to share your ideas and feedback (click on "add topic" to start a new discussion issue).<br />
<br />
Have fun :) <br />
<br />
Ingo</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Talk:Norwegian_Climate_Prediction_Model&diff=70Talk:Norwegian Climate Prediction Model2014-09-23T09:03:32Z<p>Ingo: </p>
<hr />
<div>This is a first try for a layout of the wiki. <br />
<br />
Please feel free to change/add sections and content. <br />
<br />
Use the discussion function of the wiki to share your ideas and feedback (click on "add topic" to start a new discussion issue).<br />
<br />
Have fun :) <br />
<br />
Ingo</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Talk:Norwegian_Climate_Prediction_Model&diff=69Talk:Norwegian Climate Prediction Model2014-09-23T09:00:53Z<p>Ingo: </p>
<hr />
<div>This is a first try for a layout of the wiki. <br />
<br />
Please feel free to change/add sections and content. <br />
<br />
Use the discussion function of the wiki to share your ideas and feedback.<br />
<br />
Have fun :) <br />
<br />
Ingo</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Talk:Norwegian_Climate_Prediction_Model&diff=68Talk:Norwegian Climate Prediction Model2014-09-23T09:00:05Z<p>Ingo: Created page with "This is a first try for a layout of the wiki. Please feel free to change/add sections and content. Use the discussion function of the wiki to share your ideas and feedback."</p>
<hr />
<div>This is a first try for a layout of the wiki. <br />
<br />
Please feel free to change/add sections and content. <br />
<br />
Use the discussion function of the wiki to share your ideas and feedback.</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_quick-start_tutorial&diff=67NorCPM quick-start tutorial2014-09-23T08:51:50Z<p>Ingo: Created page with "coming soon..."</p>
<hr />
<div>coming soon...</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=66NorCPM User Manual2014-09-23T08:51:26Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=65NorCPM User Manual2014-09-23T08:50:07Z<p>Ingo: </p>
<hr />
<div><blockquote style="color: red">'''BEFORE EDITING, PLEASE READ [[Wiki development |WIKI DEVELOPMENT]]'''</blockquote><br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Norwegian_Climate_Prediction_Model&diff=64Norwegian Climate Prediction Model2014-09-23T08:47:07Z<p>Ingo: </p>
<hr />
<div>'''[[Wiki development | PLEASE READ THIS BEFORE EDITING]]'''<br />
<br />
<br />
Coming here: <br />
* NorCPM description (see e.g. [https://www.myroms.org ROMS description])<br />
* contact information <br />
* other? <br />
<br />
<br />
== News == <br />
<br />
== Model releases ==<br />
<br />
== Prediction activities == <br />
<br />
=== Model-model prediction with assimilation of synthetic SST data === <br />
<br />
=== Evaluation of prediction hindcast simulations for the Nordic Seas === <br />
<br />
== Data products and diagnostics == <br />
<br />
== Projects using NorCPM ==<br />
<br />
== Publications, etc. ==<br />
<br />
'''Peer-review'''<br />
<br />
* [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon, F., Bethke, I., Keenlyside, N., Bentsen, M., Bertino, L., & Zheng, F. (2014). Seasonal-to-decadal predictions with the ensemble Kalman filter and the Norwegian Earth System Model: a twin experiment. Tellus A, 66. doi:10.3402/tellusa.v66.21074]<br />
<br />
== User Resources ==<br />
<br />
* [[NorCPM User Manual]]<br />
* [[NorCPM quick-start tutorial]]</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=63NorCPM User Manual2014-09-23T08:44:38Z<p>Ingo: Ingo moved page NorCPM User Manual - beta to NorCPM User Manual without leaving a redirect</p>
<hr />
<div><blockquote style="color: red">'''BEFORE EDITING, PLEASE READ [[Wiki development | WIKI DEVELOPMENT]]'''</blockquote><br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Norwegian_Climate_Prediction_Model&diff=62Norwegian Climate Prediction Model2014-09-23T08:43:20Z<p>Ingo: </p>
<hr />
<div><blockquote style="color: red">'''BEFORE EDITING, PLEASE READ [[Wiki development | WIKI DEVELOPMENT]]'''</blockquote> <br />
<br />
<br />
Coming here: <br />
* NorCPM description (see e.g. [https://www.myroms.org ROMS description])<br />
* contact information <br />
* other? <br />
<br />
<br />
== News == <br />
<br />
== Model releases ==<br />
<br />
== Prediction activities == <br />
<br />
=== Model-model prediction with assimilation of synthetic SST data === <br />
<br />
=== Evaluation of prediction hindcast simulations for the Nordic Seas === <br />
<br />
== Data products and diagnostics == <br />
<br />
== Projects using NorCPM ==<br />
<br />
== Publications, etc. ==<br />
<br />
'''Peer-review'''<br />
<br />
* [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon, F., Bethke, I., Keenlyside, N., Bentsen, M., Bertino, L., & Zheng, F. (2014). Seasonal-to-decadal predictions with the ensemble Kalman filter and the Norwegian Earth System Model: a twin experiment. Tellus A, 66. doi:10.3402/tellusa.v66.21074]<br />
<br />
== User Resources ==<br />
<br />
* [[NorCPM User Manual]]<br />
* [[NorCPM quick-start tutorial]]</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Norwegian_Climate_Prediction_Model&diff=61Norwegian Climate Prediction Model2014-09-23T08:42:49Z<p>Ingo: </p>
<hr />
<div><blockquote style="color: red">'''BEFORE EDITING, PLEASE READ [[Wiki development | WIKI DEVELOPMENT]]'''</blockquote> <br />
<br />
<br />
Coming here: <br />
* NorCPM description (see e.g. [https://www.myroms.org ROMS description])<br />
* contact information <br />
* other? <br />
<br />
<br />
== News == <br />
<br />
== Model releases ==<br />
<br />
== Prediction activities == <br />
<br />
=== Model-model prediction with assimilation of synthetic SST data === <br />
<br />
=== Evaluation of prediction hindcast simulations for the Nordic Seas === <br />
<br />
== Data products and diagnostics == <br />
<br />
== Projects using NorCPM ==<br />
<br />
== Publications, etc. ==<br />
<br />
'''Peer-review'''<br />
<br />
* [http://www.tellusa.net/index.php/tellusa/article/view/21074 Counillon, F., Bethke, I., Keenlyside, N., Bentsen, M., Bertino, L., & Zheng, F. (2014). Seasonal-to-decadal predictions with the ensemble Kalman filter and the Norwegian Earth System Model: a twin experiment. Tellus A, 66. doi:10.3402/tellusa.v66.21074]<br />
<br />
<br />
== User Resources ==<br />
<br />
* [[NorCPM User Manual]]<br />
* [[NorCPM quick-start tutorial]]</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=60Wiki development2014-09-23T08:37:00Z<p>Ingo: </p>
<hr />
<div><!-- <br />
Guidelines for this wiki: <br />
* The official wiki pages should be complete and fully functional at all times (i.e., clean of stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
--><br />
<br />
Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' to enclose ''italic'' text and three times ' to enclose '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use single [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=59Wiki development2014-09-23T08:34:21Z<p>Ingo: </p>
<hr />
<div><!-- <br />
Guidelines for this wiki: <br />
* The official wiki pages should be complete and fully functional at all times (i.e., clean of stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
--><br />
<br />
Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' around ''italic'' text and three times ' around '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use single [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=58NorCPM User Manual2014-09-23T08:33:10Z<p>Ingo: </p>
<hr />
<div><blockquote style="color: red">'''BEFORE EDITING, PLEASE READ [[Wiki development | WIKI DEVELOPMENT]]'''</blockquote><br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=57NorCPM User Manual2014-09-23T06:53:58Z<p>Ingo: </p>
<hr />
<div><blockquote style="color: red">'''BEFORE EDITING, PLEASE READ [[Wiki development | WIKI DEVELOPMENT]]'''</blockquote><br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order?)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running ensembles as single jobs ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=56Wiki development2014-09-22T16:22:08Z<p>Ingo: </p>
<hr />
<div>Guidelines for this wiki: <br />
* The official wiki pages should be complete and fully functional at all times (i.e., clean of stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Tips for wiki-development: <br />
<br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' around ''italic'' text and three times ' around '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use single [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=55Wiki development2014-09-22T16:21:12Z<p>Ingo: </p>
<hr />
<div>Guidelines for this wiki: <br />
* The official wiki pages should be complete and fully functional at all times (i.e., clean of stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Tips for wiki-development: <br />
<br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' around ''italic'' text and three times ' around '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use double [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=54Wiki development2014-09-22T16:20:11Z<p>Ingo: </p>
<hr />
<div>Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Guidelines for this wiki: <br />
* The official wiki pages should be complete and fully functional at all times(i.e., without stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
<br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' around ''italic'' text and three times ' around '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use double [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=53Wiki development2014-09-22T16:19:36Z<p>Ingo: </p>
<hr />
<div>Wiki-media resources: <br />
* [//meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Guidelines for this wiki: <br />
* At all times, the official wiki pages should be complete and fully functional (i.e., without stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
<br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' around ''italic'' text and three times ' around '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use double [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=52Wiki development2014-09-22T16:19:24Z<p>Ingo: </p>
<hr />
<div>Wiki-media resources: <br />
* //meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
<br />
Guidelines for this wiki: <br />
* At all times, the official wiki pages should be complete and fully functional (i.e., without stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
<br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' around ''italic'' text and three times ' around '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use double [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=49NorCPM User Manual2014-09-22T16:13:33Z<p>Ingo: </p>
<hr />
<div><blockquote style="color: red">'''BEFORE EDITING, PLEASE READ [[Wiki development | WIKI DEVELOPMENT]]'''</blockquote><br />
<br />
<br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order?)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Component, resolution and forcing options === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuation of existing run ==== <br />
<br />
==== Running an ensemble as single job ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Wiki_development&diff=46Wiki development2014-09-22T16:07:57Z<p>Ingo: Created page with "Guidelines for this wiki: * At all times, the official wiki pages should be complete and fully functional (i.e., without stubs, broken links, etc). If your edits are too comp..."</p>
<hr />
<div>Guidelines for this wiki: <br />
* At all times, the official wiki pages should be complete and fully functional (i.e., without stubs, broken links, etc). If your edits are too comprehensive to be done in a single session then please do your edits first on a development page (this one has "- beta" in its name, create it if it does not exist) and then copy and paste to the official page once the content is complete. <br />
* Do not delete any content from other people without consulting them. The wiki has a discussion feature which can be used for this purpose. <br />
<br />
Examples for model wikis:<br />
* [http://wiki.mcs.anl.gov/FOAM/index.php/Users_Guide FOAM user-guide]<br />
* [http://mitgcm.org/public/r2_manual/latest/online_documents/manual.html MITgcm user-manual]<br />
* [https://wiki.met.no/noresm/start NorESM wiki]<br />
<br />
Examples for model homepages: <br />
* [https://www.myroms.org ROMS homepage]<br />
* [http://www.wrf-model.org/index.php WRF homepage], [http://www2.mmm.ucar.edu/wrf/users WRF users page] <br />
* [http://hycom.org/hycom HYCOM homepage] <br />
* [http://www2.cesm.ucar.edu CESM homepage] <br />
* [http://www.mcs.anl.gov/foam FOAM homepage]<br />
* [http://mitgcm.org/public/docs.html MITgcm homepage]<br />
* [http://icmc.ipsl.fr/index.php/icmc-models IPSL models] <br />
* [http://www.giss.nasa.gov/tools/modelE GISS model]<br />
<br />
Tips for wiki-development: <br />
<br />
* ''Creating a new page:'' Put the title of the new page in the search field. If the field does not exist you will get the option to create it. <br />
* ''Deleting and renaming pages:'' Next to the search field at the top of the page is a downward pointing arrow. If you move the mouse pointer over the arrow a scroll menu will appear with the options to delete or move (i.e., rename) the wiki page. If you move a page, you will have the option set up a re-direct from the old page name (this option is activated by default). Please deactivate the re-direct option if the re-direct is not needed (e.g., if you have created a new page and you want to rename it shortly after, i.e. before anyone knows of its existence) <br />
* ''Formatting'': Use two times ' around ''italic'' text and three times ' around '''bold''' text. <br />
* ''Lists'': Start the line with * in the first column, followed by a single space and then the text to be listed. <br />
* ''Creating sections and subsections:'' Use <code>==</code> around the title of top-level sections and <code>===</code> etc. around the title of subsections. <br />
* ''Internal link to a page'': To link to another page use double [ ] around the name of the page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. <br />
* ''Internal link to a section'': As above, but after the page name add # followed by the name of the section. For example <pre> [[NorCPM User Manual - beta#Running the model|Instructions for running NorCPM]]</pre> <br />
* ''External link'': To link to an external page use double [ ] around the URL of the external page. Optionally, you can specify an alternative link title by adding | followed by the alternative text. For example <pre>[https://wiki.met.no/noresm/start NorESM wiki|NorESM wiki]</pre> <br />
* ''Comments'': To comment (i.e., hide) text use <pre><!-- some hidden text --></pre></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=45NorCPM User Manual2014-09-22T15:46:43Z<p>Ingo: </p>
<hr />
<div><br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order?)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Model and forcing configurations === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuing a run ==== <br />
<br />
==== Running an ensemble as single job ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
<!-- == Model versions == --><br />
<br />
<!-- == Change history == --></div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=37NorCPM User Manual2014-09-22T08:51:06Z<p>Ingo: </p>
<hr />
<div><br />
<center>''' Ingo Bethke '''</center> <br />
<center>''' Francois Counillon '''</center> <br />
<center style="color: red">''' enter your name here (alphabetical order?)'''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Climate Prediction Model ===<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Model and forcing configurations === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuing a run ==== <br />
<br />
==== Running an ensemble as single job ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
== Model versions == <br />
<br />
== Change history ==</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=NorCPM_User_Manual&diff=36NorCPM User Manual2014-09-22T08:48:16Z<p>Ingo: </p>
<hr />
<div><br />
<center>''' Francois Counillon '''</center> <br />
<center>''' Ingo Bethke '''</center> <br />
<br />
== Overview ==<br />
<br />
=== Norwegian Climate Prediction Model ===<br />
<br />
=== Norwegian Earth System Model ===<br />
<br />
=== Ensemble Kalman Filter === <br />
<br />
== Getting started with NorESM ==<br />
<br />
=== Prerequisites === <br />
<br />
=== Obtaining and installing the model === <br />
<br />
=== Model and directory structure === <br />
<br />
=== Model and forcing configurations === <br />
<br />
=== Setting up experiments === <br />
<br />
==== Creating new experiments ==== <br />
<br />
==== Cloning existing experiments ==== <br />
<br />
==== Configuration of initialisation ==== <br />
<br />
==== Customisation of output ==== <br />
<br />
==== Building the model ==== <br />
<br />
==== Setting up ensembles ==== <br />
<br />
=== Running the model === <br />
<br />
==== Initial run ==== <br />
<br />
==== Continuing a run ==== <br />
<br />
==== Running an ensemble as single job ==== <br />
<br />
== Getting started with EnKf ==<br />
<br />
== Post-processing and long-term storage == <br />
<br />
=== Output compression === <br />
<br />
=== Archiving output to NorStore resources === <br />
<br />
==== Disk storage ==== <br />
<br />
==== Tape storage ====<br />
<br />
==== National archive ==== <br />
<br />
== Diagnostics and analysis == <br />
<br />
== Model versions == <br />
<br />
== Change history ==</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Main_Page&diff=28Main Page2014-09-21T19:02:07Z<p>Ingo: Ingo moved page Main Page to Norwegian Climate Prediction Model: Changing name of title page</p>
<hr />
<div>#REDIRECT [[Norwegian Climate Prediction Model]]</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Norwegian_Climate_Prediction_Model&diff=27Norwegian Climate Prediction Model2014-09-21T19:02:07Z<p>Ingo: Ingo moved page Main Page to Norwegian Climate Prediction Model: Changing name of title page</p>
<hr />
<div>'''MediaWiki has been successfully installed.'''<br />
<br />
Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.<br />
<br />
== Getting started ==<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Norwegian_Climate_Prediction_Model&diff=26Norwegian Climate Prediction Model2014-09-21T18:59:04Z<p>Ingo: Ingo moved page Norwegian Climate Prediction Model (NorCPM) to Main Page over a redirect without leaving a redirect</p>
<hr />
<div>'''MediaWiki has been successfully installed.'''<br />
<br />
Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.<br />
<br />
== Getting started ==<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]</div>Ingohttp://norcpm.wiki.uib.no/index.php?title=Norwegian_Climate_Prediction_Model&diff=24Norwegian Climate Prediction Model2014-09-21T18:57:58Z<p>Ingo: Ingo moved page Main Page to Norwegian Climate Prediction Model (NorCPM): Changing name of title page</p>
<hr />
<div>'''MediaWiki has been successfully installed.'''<br />
<br />
Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.<br />
<br />
== Getting started ==<br />
* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]</div>Ingo